STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_0936Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily. (615 aa)    
Predicted Functional Partners:
Noc_2184
ABC transporter, inner membrane subunit.
 
 0.997
Noc_2772
ABC transporter, inner membrane subunit.
 
 0.997
Noc_2185
ABC transporter, inner membrane subunit.
 
 0.994
Noc_0934
ABC transporter, inner membrane subunit.
 
 0.990
Noc_0933
ABC transporter, inner membrane subunit.
 
 0.987
Noc_1344
Extracellular solute-binding protein, family 5.
 
 
  0.960
Noc_2770
Extracellular solute-binding protein, family 5.
 
  0.955
Noc_2773
ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
  
  
 
0.904
Noc_2771
ABC transporter, inner membrane subunit.
  
 0.847
Noc_1768
Extracellular solute-binding protein, family 5.
 
    0.551
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.