Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Noc_0460 | Noc_0592 | Short-chain dehydrogenase/reductase SDR. | Zinc-containing alcohol dehydrogenase superfamily. | 0.672 |
Noc_0460 | Noc_1012 | Short-chain dehydrogenase/reductase SDR. | Protein of unknown function DUF326. | 0.515 |
Noc_0460 | Noc_1589 | Short-chain dehydrogenase/reductase SDR. | Conserved hypothetical protein. | 0.529 |
Noc_0592 | Noc_0460 | Zinc-containing alcohol dehydrogenase superfamily. | Short-chain dehydrogenase/reductase SDR. | 0.672 |
Noc_0592 | Noc_1012 | Zinc-containing alcohol dehydrogenase superfamily. | Protein of unknown function DUF326. | 0.625 |
Noc_1012 | Noc_0460 | Protein of unknown function DUF326. | Short-chain dehydrogenase/reductase SDR. | 0.515 |
Noc_1012 | Noc_0592 | Protein of unknown function DUF326. | Zinc-containing alcohol dehydrogenase superfamily. | 0.625 |
Noc_1012 | Noc_1073 | Protein of unknown function DUF326. | Ribonuclease BN. | 0.482 |
Noc_1012 | Noc_1589 | Protein of unknown function DUF326. | Conserved hypothetical protein. | 0.833 |
Noc_1012 | Noc_2962 | Protein of unknown function DUF326. | Conserved hypothetical protein, involved in inositol catabolism. | 0.540 |
Noc_1073 | Noc_1012 | Ribonuclease BN. | Protein of unknown function DUF326. | 0.482 |
Noc_1073 | Noc_2962 | Ribonuclease BN. | Conserved hypothetical protein, involved in inositol catabolism. | 0.428 |
Noc_1589 | Noc_0460 | Conserved hypothetical protein. | Short-chain dehydrogenase/reductase SDR. | 0.529 |
Noc_1589 | Noc_1012 | Conserved hypothetical protein. | Protein of unknown function DUF326. | 0.833 |
Noc_1589 | Noc_2962 | Conserved hypothetical protein. | Conserved hypothetical protein, involved in inositol catabolism. | 0.649 |
Noc_2962 | Noc_1012 | Conserved hypothetical protein, involved in inositol catabolism. | Protein of unknown function DUF326. | 0.540 |
Noc_2962 | Noc_1073 | Conserved hypothetical protein, involved in inositol catabolism. | Ribonuclease BN. | 0.428 |
Noc_2962 | Noc_1589 | Conserved hypothetical protein, involved in inositol catabolism. | Conserved hypothetical protein. | 0.649 |