STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_1288Universal stress protein UspA. (310 aa)    
Predicted Functional Partners:
Noc_1287
Cation antiporter.
 
     0.537
Noc_1283
Conserved hypothetical protein.
 
     0.531
Noc_1286
Multisubunit sodium/proton antiporter, MrpF subunit; TC 2.A.63.1.
 
     0.531
Noc_1284
Hypothetical protein.
 
     0.519
Noc_1282
Multisubunit sodium/proton antiporter, MrpC subunit; TC 2.A.63.1.
       0.466
Noc_1285
Multisubunit sodium/proton antiporter, MrpG subunit; TC 2.A.63.1.
       0.465
Noc_3064
Kef-type potassium/proton antiporter, CPA2 family; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
 0.460
Noc_1165
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.434
Noc_2256
Methylated-DNA-(protein)-cysteine S-methyltransferase.
   
    0.418
Noc_1281
Multisubunit sodium/proton antiporter, MrpD subunit; TC 2.A.63.1.
       0.404
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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