STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_1602Hypothetical protein. (109 aa)    
Predicted Functional Partners:
Noc_1271
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
  
 0.986
Noc_2977
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 
 0.969
Noc_0060
ATP-binding region, ATPase-like protein.
  
 
 0.958
Noc_0376
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
  
 0.892
Noc_1758
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
  
 0.892
Noc_0206
Protein phosphatase 2C-like, stage II sporulation E.
  
 
 0.859
Noc_2358
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
   0.853
Noc_2784
ABC-type transport system involved in resistance to organic solvents periplasmic component.
  
   0.840
Noc_2786
ABC transporter, ATPase subunit.
   
   0.837
Noc_2785
Protein of unknown function DUF140.
   
   0.836
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.