STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_1797Conserved hypothetical protein. (483 aa)    
Predicted Functional Partners:
Noc_1799
NADH-flavin oxidoreductase/NADH oxidase.
 
     0.829
Noc_1025
Patatin.
 
     0.647
Noc_1798
Conserved hypothetical protein.
 
   
0.599
Noc_1795
Hypothetical protein.
 
     0.576
Noc_1481
Hypothetical protein.
  
   0.513
Noc_1796
Glucose-methanol-choline oxidoreductase.
 
     0.493
Noc_1988
Putative glycosyl transferase.
  
     0.474
Noc_1653
Hypothetical protein.
  
     0.470
Noc_1457
40-residue YVTN beta-propeller repeat.
   
   0.451
Noc_2720
Hypothetical protein.
   
   0.451
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.