STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_1983Protein-tyrosine kinase. (297 aa)    
Predicted Functional Partners:
Noc_1985
Polysaccharide export protein.
 
 
 0.959
Noc_1999
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.959
Noc_1508
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.934
Noc_1984
Lipopolysaccharide biosynthesis.
  
 0.918
Noc_1525
Polysaccharide export protein.
 
 
 0.859
Noc_1982
Hypothetical protein.
 
     0.808
Noc_1978
Conserved hypothetical protein.
 
    0.807
Noc_1981
Polysaccharide deacetylase.
 
     0.803
Noc_1980
Conserved hypothetical protein.
 
     0.798
Noc_1496
Capsular polysaccharide biosynthesis protein.
 
  
 0.797
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.