STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_2005Protein of unknown function DUF1597. (415 aa)    
Predicted Functional Partners:
Noc_1193
Abortive infection protein.
  
     0.766
Noc_2136
Conserved hypothetical protein.
  
     0.756
Noc_1251
Conserved hypothetical protein; Belongs to the UPF0753 family.
  
     0.728
Noc_1585
DNA mismatch repair protein MutS-like protein.
  
     0.726
Noc_1319
Purine-like phosphorylase, family 1.
  
    0.697
Noc_1541
Outer membrane efflux protein.
  
   
 0.697
Noc_1224
Hypothetical protein.
  
     0.686
Noc_1625
Lipoprotein, putative.
  
     0.671
Noc_2506
Multicopper oxidase, type 3.
  
     0.669
Noc_1304
Conserved hypothetical protein.
  
     0.659
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.