Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
Noc_2102Competence protein F. (246 aa)    
Predicted Functional Partners:
Noc_2672
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.963
Noc_3012
DNA protecting protein DprA.
 
 
 0.953
Noc_2003
Mg chelatase-related protein.
 
  
 0.912
Noc_1271
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
  
 0.886
Noc_2377
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.837
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.807
Noc_0176
Prephenate dehydrogenase.
   
    0.801
Noc_2682
Diguanylate cyclase/phosphodiesterase.
  
    0.793
Noc_0355
Protein of unknown function UPF0102; Belongs to the UPF0102 family.
 
    0.782
Noc_0376
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
    0.770
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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