STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_2102Competence protein F. (246 aa)    
Predicted Functional Partners:
Noc_2672
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.968
Noc_3012
DNA protecting protein DprA.
 
 
 0.959
Noc_1271
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
  
 0.916
Noc_0236
DNA replication and repair protein RadC; Belongs to the UPF0758 family.
 
    0.853
Noc_2003
Mg chelatase-related protein.
 
  
 0.852
Noc_2682
Diguanylate cyclase/phosphodiesterase.
  
  
 0.846
Noc_0376
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
  
 0.839
Noc_0625
DNA repair protein RadC.
 
    0.839
Noc_1758
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
  
 0.839
Noc_2377
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.824
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.