STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_2136Conserved hypothetical protein. (636 aa)    
Predicted Functional Partners:
Noc_2135
Hypothetical protein.
       0.773
Noc_2506
Multicopper oxidase, type 3.
  
     0.771
Noc_1193
Abortive infection protein.
 
     0.770
Noc_1088
Transcriptional regulator, MarR family.
  
     0.768
Noc_1624
Signal transduction histidine kinase.
  
     0.768
Noc_1741
Copper resistance D.
  
     0.767
Noc_1224
Hypothetical protein.
  
     0.763
Noc_2005
Protein of unknown function DUF1597.
  
     0.756
Noc_1625
Lipoprotein, putative.
  
     0.753
Noc_2972
Hypothetical protein.
  
     0.750
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.