Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Noc_2182ABC polysaccharide/polyol phosphate export systems, inner membrane subunit. (259 aa)    
Predicted Functional Partners:
Noc_2181
ABC transporter, ATPase subunit.
 
 0.999
Noc_1228
ABC transporter, ATPase subunit.
 
 0.996
Noc_0731
ABC transporter, ATPase subunit.
 
 
 0.981
Noc_2178
Glycosyl transferase, family 2.
 
  
 0.937
Noc_1227
ABC-type polysaccharide/polyol phosphate export systems permease component.
  
  
 
0.922
Noc_2172
Hypothetical protein.
 
    0.849
Noc_2179
Acetyltransferase (isoleucine patch superfamily).
     
 0.790
Noc_2177
Rhamnosyltransferase.
 
  
 0.785
Noc_2180
Hypothetical protein.
       0.784
Noc_1985
Polysaccharide export protein.
  
  
 0.736
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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