Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Noc_2265Conserved hypothetical protein, AsmA. (812 aa)    
Predicted Functional Partners:
Noc_2267
A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs.
  
    0.782
Noc_2268
Fe(II) trafficking protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.
       0.774
Noc_2264
Hypothetical protein.
       0.773
Noc_2266
Hypothetical protein.
       0.758
Noc_2263
Conserved hypothetical protein.
 
     0.617
Noc_0371
Protein of unknown function DUF490.
  
   
 0.590
Noc_0505
HemY-like protein.
  
     0.459
Noc_0504
Protein of unknown function DUF513, hemX.
  
     0.437
Noc_2262
Cytochrome c assembly protein.
 
     0.434
Noc_0370
Outer membrane protein.
  
     0.433
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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