Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Noc_1158 | Noc_1164 | Type I restriction-modification system, M subunit. | Conserved hypothetical protein. | 0.764 |
Noc_1158 | Noc_2732 | Type I restriction-modification system, M subunit. | Protein of unknown function DUF45. | 0.416 |
Noc_1158 | Noc_2909 | Type I restriction-modification system, M subunit. | Type I site-specific deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.747 |
Noc_1164 | Noc_1158 | Conserved hypothetical protein. | Type I restriction-modification system, M subunit. | 0.764 |
Noc_1164 | Noc_2732 | Conserved hypothetical protein. | Protein of unknown function DUF45. | 0.774 |
Noc_1164 | Noc_2909 | Conserved hypothetical protein. | Type I site-specific deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.514 |
Noc_2732 | Noc_1158 | Protein of unknown function DUF45. | Type I restriction-modification system, M subunit. | 0.416 |
Noc_2732 | Noc_1164 | Protein of unknown function DUF45. | Conserved hypothetical protein. | 0.774 |
Noc_2732 | Noc_2733 | Protein of unknown function DUF45. | Conserved hypothetical protein. | 0.524 |
Noc_2732 | Noc_2734 | Protein of unknown function DUF45. | Glycoside hydrolase, family 57. | 0.434 |
Noc_2732 | Noc_2909 | Protein of unknown function DUF45. | Type I site-specific deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.444 |
Noc_2733 | Noc_2732 | Conserved hypothetical protein. | Protein of unknown function DUF45. | 0.524 |
Noc_2733 | Noc_2734 | Conserved hypothetical protein. | Glycoside hydrolase, family 57. | 0.687 |
Noc_2734 | Noc_2732 | Glycoside hydrolase, family 57. | Protein of unknown function DUF45. | 0.434 |
Noc_2734 | Noc_2733 | Glycoside hydrolase, family 57. | Conserved hypothetical protein. | 0.687 |
Noc_2909 | Noc_1158 | Type I site-specific deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. | Type I restriction-modification system, M subunit. | 0.747 |
Noc_2909 | Noc_1164 | Type I site-specific deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. | Conserved hypothetical protein. | 0.514 |
Noc_2909 | Noc_2732 | Type I site-specific deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. | Protein of unknown function DUF45. | 0.444 |