STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc_2736Conserved hypothetical protein. (309 aa)    
Predicted Functional Partners:
Noc_0894
Cytochrome c-554 precursor.
 
     0.760
Noc_2918
Protein of unknown function DUF1264.
  
     0.599
Noc_1400
PAS/PAC sensor hybrid histidine kinase.
 
   
 0.529
Noc_1271
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
 
 0.510
Noc_1583
Conserved hypothetical protein.
 
     0.510
Noc_0892
Aerobic hydroxylamine oxidoreductase precursor.
  
     0.503
Noc_2720
Hypothetical protein.
  
   
 0.496
Noc_2406
4-cresol dehydrogenase (hydroxylating).
  
     0.492
Noc_2416
Intradiol ring-cleavage dioxygenase.
  
     0.485
Noc_2682
Diguanylate cyclase/phosphodiesterase.
  
  
 0.479
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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