Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Noc_1582 | Noc_2964 | Allosteric NADP-dependent malic enzyme; Phosphate acetyltransferase. | Conserved hypothetical protein. | 0.410 |
Noc_1847 | Noc_2964 | Nitric oxide reductase activation protein. | Conserved hypothetical protein. | 0.402 |
Noc_2962 | Noc_2963 | Conserved hypothetical protein, involved in inositol catabolism. | Conserved hypothetical protein. | 0.570 |
Noc_2962 | Noc_2964 | Conserved hypothetical protein, involved in inositol catabolism. | Conserved hypothetical protein. | 0.570 |
Noc_2963 | Noc_2962 | Conserved hypothetical protein. | Conserved hypothetical protein, involved in inositol catabolism. | 0.570 |
Noc_2963 | Noc_2964 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.963 |
Noc_2963 | Noc_2965 | Conserved hypothetical protein. | Hypothetical protein. | 0.516 |
Noc_2964 | Noc_1582 | Conserved hypothetical protein. | Allosteric NADP-dependent malic enzyme; Phosphate acetyltransferase. | 0.410 |
Noc_2964 | Noc_1847 | Conserved hypothetical protein. | Nitric oxide reductase activation protein. | 0.402 |
Noc_2964 | Noc_2962 | Conserved hypothetical protein. | Conserved hypothetical protein, involved in inositol catabolism. | 0.570 |
Noc_2964 | Noc_2963 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.963 |
Noc_2964 | Noc_2965 | Conserved hypothetical protein. | Hypothetical protein. | 0.516 |
Noc_2965 | Noc_2963 | Hypothetical protein. | Conserved hypothetical protein. | 0.516 |
Noc_2965 | Noc_2964 | Hypothetical protein. | Conserved hypothetical protein. | 0.516 |