Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Noc_0297 | Noc_0299 | Cytochrome c1. | Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
| Noc_0297 | Noc_1247 | Cytochrome c1. | Caa(3)-type oxidase, subunit IV. | 0.751 |
| Noc_0297 | Noc_1908 | Cytochrome c1. | Conserved hypothetical protein, RDD. | 0.718 |
| Noc_0297 | Noc_2000 | Cytochrome c1. | Cytochrome c, class I. | 0.782 |
| Noc_0297 | Noc_3040 | Cytochrome c1. | Cytochrome oxidase assembly. | 0.758 |
| Noc_0297 | Noc_3041 | Cytochrome c1. | Conserved hypothetical protein. | 0.495 |
| Noc_0297 | Noc_3042 | Cytochrome c1. | Conserved hypothetical protein. | 0.660 |
| Noc_0297 | Noc_3049 | Cytochrome c1. | Cytochrome c, class I. | 0.786 |
| Noc_0297 | Noc_3050 | Cytochrome c1. | Cytochrome c, class I. | 0.781 |
| Noc_0299 | Noc_0297 | Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome c1. | 0.999 |
| Noc_0299 | Noc_1247 | Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Caa(3)-type oxidase, subunit IV. | 0.589 |
| Noc_0299 | Noc_1908 | Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Conserved hypothetical protein, RDD. | 0.676 |
| Noc_0299 | Noc_2000 | Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome c, class I. | 0.660 |
| Noc_0299 | Noc_3040 | Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome oxidase assembly. | 0.512 |
| Noc_0299 | Noc_3049 | Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome c, class I. | 0.821 |
| Noc_0299 | Noc_3050 | Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome c, class I. | 0.672 |
| Noc_1247 | Noc_0297 | Caa(3)-type oxidase, subunit IV. | Cytochrome c1. | 0.751 |
| Noc_1247 | Noc_0299 | Caa(3)-type oxidase, subunit IV. | Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.589 |
| Noc_1247 | Noc_3040 | Caa(3)-type oxidase, subunit IV. | Cytochrome oxidase assembly. | 0.502 |
| Noc_1247 | Noc_3041 | Caa(3)-type oxidase, subunit IV. | Conserved hypothetical protein. | 0.423 |
page 1 of 4