STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ69051.1Putative D-amino-acid dehydrogenase (DadA-like). (415 aa)    
Predicted Functional Partners:
CDZ70562.1
D-amino-acid dehydrogenase.
  
  
 
0.925
CDZ71953.1
Histidinol-phosphate transaminase.
 
  
 0.913
CDZ72048.1
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.909
CDZ69852.1
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.907
CDZ72215.1
D-amino-acid transaminase.
     
 0.901
CDZ69656.1
Aspartate transaminase.
    
 0.900
CDZ70075.1
Aspartate/tyrosine/aromatic aminotransferase.
    
 0.900
hisC-2
Histidinol-phosphate transaminase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
  0.900
CDZ71612.1
Histidinol-phosphate transaminase.
   
 
  0.900
CDZ69381.1
Sarcosine oxidase, alpha subunit.
  
 0.808
Your Current Organism:
Neorhizobium galegae orientalis
NCBI taxonomy Id: 323655
Other names: N. galegae bv. orientalis, Neorhizobium galegae biovar orientalis, Neorhizobium galegae bv. orientalis, Rhizobium galegae biovar orientalis, Rhizobium galegae bv. orientalis
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