Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDZ69051.1 | CDZ69381.1 | NGAL_HAMBI2610_06480 | NGAL_HAMBI2610_09800 | Putative D-amino-acid dehydrogenase (DadA-like). | Sarcosine oxidase, alpha subunit. | 0.808 |
CDZ69051.1 | CDZ69656.1 | NGAL_HAMBI2610_06480 | NGAL_HAMBI2610_12550 | Putative D-amino-acid dehydrogenase (DadA-like). | Aspartate transaminase. | 0.900 |
CDZ69051.1 | CDZ69852.1 | NGAL_HAMBI2610_06480 | NGAL_HAMBI2610_14530 | Putative D-amino-acid dehydrogenase (DadA-like). | 4-hydroxyphenylpyruvate dioxygenase. | 0.907 |
CDZ69051.1 | CDZ70075.1 | NGAL_HAMBI2610_06480 | NGAL_HAMBI2610_16760 | Putative D-amino-acid dehydrogenase (DadA-like). | Aspartate/tyrosine/aromatic aminotransferase. | 0.900 |
CDZ69051.1 | CDZ70562.1 | NGAL_HAMBI2610_06480 | NGAL_HAMBI2610_21640 | Putative D-amino-acid dehydrogenase (DadA-like). | D-amino-acid dehydrogenase. | 0.925 |
CDZ69051.1 | CDZ71612.1 | NGAL_HAMBI2610_06480 | NGAL_HAMBI2610_32280 | Putative D-amino-acid dehydrogenase (DadA-like). | Histidinol-phosphate transaminase. | 0.900 |
CDZ69051.1 | CDZ71953.1 | NGAL_HAMBI2610_06480 | NGAL_HAMBI2610_35690 | Putative D-amino-acid dehydrogenase (DadA-like). | Histidinol-phosphate transaminase. | 0.913 |
CDZ69051.1 | CDZ72048.1 | NGAL_HAMBI2610_06480 | NGAL_HAMBI2610_36650 | Putative D-amino-acid dehydrogenase (DadA-like). | 4-hydroxyphenylpyruvate dioxygenase. | 0.909 |
CDZ69051.1 | CDZ72215.1 | NGAL_HAMBI2610_06480 | NGAL_HAMBI2610_38390 | Putative D-amino-acid dehydrogenase (DadA-like). | D-amino-acid transaminase. | 0.901 |
CDZ69051.1 | hisC-2 | NGAL_HAMBI2610_06480 | NGAL_HAMBI2610_27410 | Putative D-amino-acid dehydrogenase (DadA-like). | Histidinol-phosphate transaminase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.900 |
CDZ69381.1 | CDZ69051.1 | NGAL_HAMBI2610_09800 | NGAL_HAMBI2610_06480 | Sarcosine oxidase, alpha subunit. | Putative D-amino-acid dehydrogenase (DadA-like). | 0.808 |
CDZ69381.1 | CDZ70562.1 | NGAL_HAMBI2610_09800 | NGAL_HAMBI2610_21640 | Sarcosine oxidase, alpha subunit. | D-amino-acid dehydrogenase. | 0.808 |
CDZ69656.1 | CDZ69051.1 | NGAL_HAMBI2610_12550 | NGAL_HAMBI2610_06480 | Aspartate transaminase. | Putative D-amino-acid dehydrogenase (DadA-like). | 0.900 |
CDZ69656.1 | CDZ69852.1 | NGAL_HAMBI2610_12550 | NGAL_HAMBI2610_14530 | Aspartate transaminase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.912 |
CDZ69656.1 | CDZ70075.1 | NGAL_HAMBI2610_12550 | NGAL_HAMBI2610_16760 | Aspartate transaminase. | Aspartate/tyrosine/aromatic aminotransferase. | 0.921 |
CDZ69656.1 | CDZ70562.1 | NGAL_HAMBI2610_12550 | NGAL_HAMBI2610_21640 | Aspartate transaminase. | D-amino-acid dehydrogenase. | 0.900 |
CDZ69656.1 | CDZ71612.1 | NGAL_HAMBI2610_12550 | NGAL_HAMBI2610_32280 | Aspartate transaminase. | Histidinol-phosphate transaminase. | 0.841 |
CDZ69656.1 | CDZ71953.1 | NGAL_HAMBI2610_12550 | NGAL_HAMBI2610_35690 | Aspartate transaminase. | Histidinol-phosphate transaminase. | 0.800 |
CDZ69656.1 | CDZ72048.1 | NGAL_HAMBI2610_12550 | NGAL_HAMBI2610_36650 | Aspartate transaminase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.914 |
CDZ69656.1 | CDZ72215.1 | NGAL_HAMBI2610_12550 | NGAL_HAMBI2610_38390 | Aspartate transaminase. | D-amino-acid transaminase. | 0.917 |
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