STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ71162.1HNH endonuclease. (185 aa)    
Predicted Functional Partners:
CDZ71161.1
HhH-GPD family protein.
 
     0.637
CDZ69644.1
Hypothetical protein.
 
    0.557
CDZ71160.1
Glutamyl-tRNA synthetase, class Ic; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.529
babI
Modification methylase BabI; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.520
Your Current Organism:
Neorhizobium galegae orientalis
NCBI taxonomy Id: 323655
Other names: N. galegae bv. orientalis, Neorhizobium galegae biovar orientalis, Neorhizobium galegae bv. orientalis, Rhizobium galegae biovar orientalis, Rhizobium galegae bv. orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.