STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ71362.1Similar to tr|Q3MDF0|Glycosyl transferase. (391 aa)    
Predicted Functional Partners:
wcaI
Colanic acid biosynthesis glycosyl transferase WcaI.
 
     0.923
CDZ71361.1
Bme4 protein.
 
  
 0.910
kdtX
Glycosyltransferase, family 2.
 
   0.903
CDZ71364.1
CgeB family protein.
 
    0.890
CDZ71363.1
Glycosyltransferase, family 1.
 
     0.883
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 
    0.834
CDZ71366.1
Hypothetical protein.
  
  
 0.832
bme9
GDP-mannose 4,6-dehydratase Bme9; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
  
 0.825
CDZ71365.1
Hypothetical protein.
       0.773
CDZ71367.1
Hypothetical protein.
       0.727
Your Current Organism:
Neorhizobium galegae orientalis
NCBI taxonomy Id: 323655
Other names: N. galegae bv. orientalis, Neorhizobium galegae biovar orientalis, Neorhizobium galegae bv. orientalis, Rhizobium galegae biovar orientalis, Rhizobium galegae bv. orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.