STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ71683.1Putative integral membrane protein. (95 aa)    
Predicted Functional Partners:
CDZ71682.1
UPF0276 protein; Belongs to the UPF0276 family.
 
  
 0.983
CDZ71681.1
Conserved hypothetical protein.
 
  
 0.967
CDZ71680.1
Putative membrane protein, DoxD domain.
 
  
 0.934
CDZ69089.1
ATPase, P-type (Transporting), HAD superfamily, subfamily IC.
   
    0.616
nodO
NodO.
  
    0.462
CDZ69029.1
Extracytoplasmic function alternative sigma factor.
 
   
 0.455
CDZ68445.1
Hypothetical protein.
   
    0.432
cheX
Chemotaxis protein CheX.
   
    0.432
CDZ73096.1
Carboxymuconolactone decarboxylase.
  
    0.404
Your Current Organism:
Neorhizobium galegae orientalis
NCBI taxonomy Id: 323655
Other names: N. galegae bv. orientalis, Neorhizobium galegae biovar orientalis, Neorhizobium galegae bv. orientalis, Rhizobium galegae biovar orientalis, Rhizobium galegae bv. orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.