STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ71838.1Oxidoreductase domain protein. (356 aa)    
Predicted Functional Partners:
CDZ71839.1
Oxidoreductase family protein.
 
     0.927
yteT
YteT.
 
    
0.834
CDZ71843.1
Putative oligogalacturonide ABC transport system inner membrane permease.
 
     0.769
YesQ
Putative oligogalacturonide ABC transport system inner membrane component.
 
     0.746
yesO
YesO.
 
     0.698
CDZ70809.1
IolD protein; Belongs to the TPP enzyme family.
 
  
 0.683
CDZ72803.1
Oxidoreductase domain protein.
  
     0.679
CDZ71841.1
ATPase component of ABC-type sugar transporter; Belongs to the ABC transporter superfamily.
       0.661
CDZ70807.1
Myo-inositol catabolism IolB domain protein.
 
  
 0.653
CDZ72802.1
Sugar phosphate isomerase/epimerase.
 
  
 0.572
Your Current Organism:
Neorhizobium galegae orientalis
NCBI taxonomy Id: 323655
Other names: N. galegae bv. orientalis, Neorhizobium galegae biovar orientalis, Neorhizobium galegae bv. orientalis, Rhizobium galegae biovar orientalis, Rhizobium galegae bv. orientalis
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