Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDZ69568.1 | CDZ71431.1 | NGAL_HAMBI2610_11670 | NGAL_HAMBI2610_30460 | Anthranilate synthase. | Bifunctional riboflavin deaminase-reductase. | 0.568 |
CDZ69568.1 | CDZ73834.1 | NGAL_HAMBI2610_11670 | NGAL_HAMBI2610_54660 | Anthranilate synthase. | Aminodeoxychorismate synthase, component I. | 0.980 |
CDZ69568.1 | CDZ74119.1 | NGAL_HAMBI2610_11670 | NGAL_HAMBI2610_57510 | Anthranilate synthase. | Dihydropteroate synthase. | 0.845 |
CDZ69568.1 | CDZ74120.1 | NGAL_HAMBI2610_11670 | NGAL_HAMBI2610_57520 | Anthranilate synthase. | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.527 |
CDZ69568.1 | CDZ74121.1 | NGAL_HAMBI2610_11670 | NGAL_HAMBI2610_57530 | Anthranilate synthase. | 2-amino-4-hydroxy-6-hydroxymethyldihydrop teridine diphosphokinase. | 0.771 |
CDZ69568.1 | folC | NGAL_HAMBI2610_11670 | NGAL_HAMBI2610_55230 | Anthranilate synthase. | Bifunctional protein FolC; Belongs to the folylpolyglutamate synthase family. | 0.518 |
CDZ69568.1 | folE | NGAL_HAMBI2610_11670 | NGAL_HAMBI2610_45740 | Anthranilate synthase. | GTP cyclohydrolase 1. | 0.557 |
CDZ69568.1 | panC | NGAL_HAMBI2610_11670 | NGAL_HAMBI2610_56520 | Anthranilate synthase. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.501 |
CDZ69568.1 | ribH | NGAL_HAMBI2610_11670 | NGAL_HAMBI2610_30430 | Anthranilate synthase. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.424 |
CDZ71431.1 | CDZ69568.1 | NGAL_HAMBI2610_30460 | NGAL_HAMBI2610_11670 | Bifunctional riboflavin deaminase-reductase. | Anthranilate synthase. | 0.568 |
CDZ71431.1 | CDZ73834.1 | NGAL_HAMBI2610_30460 | NGAL_HAMBI2610_54660 | Bifunctional riboflavin deaminase-reductase. | Aminodeoxychorismate synthase, component I. | 0.553 |
CDZ71431.1 | CDZ74119.1 | NGAL_HAMBI2610_30460 | NGAL_HAMBI2610_57510 | Bifunctional riboflavin deaminase-reductase. | Dihydropteroate synthase. | 0.755 |
CDZ71431.1 | CDZ74120.1 | NGAL_HAMBI2610_30460 | NGAL_HAMBI2610_57520 | Bifunctional riboflavin deaminase-reductase. | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.661 |
CDZ71431.1 | CDZ74121.1 | NGAL_HAMBI2610_30460 | NGAL_HAMBI2610_57530 | Bifunctional riboflavin deaminase-reductase. | 2-amino-4-hydroxy-6-hydroxymethyldihydrop teridine diphosphokinase. | 0.766 |
CDZ71431.1 | folC | NGAL_HAMBI2610_30460 | NGAL_HAMBI2610_55230 | Bifunctional riboflavin deaminase-reductase. | Bifunctional protein FolC; Belongs to the folylpolyglutamate synthase family. | 0.484 |
CDZ71431.1 | folE | NGAL_HAMBI2610_30460 | NGAL_HAMBI2610_45740 | Bifunctional riboflavin deaminase-reductase. | GTP cyclohydrolase 1. | 0.588 |
CDZ71431.1 | panC | NGAL_HAMBI2610_30460 | NGAL_HAMBI2610_56520 | Bifunctional riboflavin deaminase-reductase. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.674 |
CDZ71431.1 | ribB | NGAL_HAMBI2610_30460 | NGAL_HAMBI2610_08510 | Bifunctional riboflavin deaminase-reductase. | 3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.999 |
CDZ71431.1 | ribH | NGAL_HAMBI2610_30460 | NGAL_HAMBI2610_30430 | Bifunctional riboflavin deaminase-reductase. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.980 |
CDZ73834.1 | CDZ69568.1 | NGAL_HAMBI2610_54660 | NGAL_HAMBI2610_11670 | Aminodeoxychorismate synthase, component I. | Anthranilate synthase. | 0.980 |
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