Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDZ33338.1 | CDZ33340.1 | NGAL_HAMBI1146_03260 | NGAL_HAMBI1146_03270 | Electron transport protein SCO1/SenC. | Ribosomal protein L11 methyltransferase. | 0.664 |
CDZ33340.1 | CDZ33338.1 | NGAL_HAMBI1146_03270 | NGAL_HAMBI1146_03260 | Ribosomal protein L11 methyltransferase. | Electron transport protein SCO1/SenC. | 0.664 |
CDZ33340.1 | CDZ33518.1 | NGAL_HAMBI1146_03270 | NGAL_HAMBI1146_04180 | Ribosomal protein L11 methyltransferase. | DnaJ family molecular chaperone. | 0.575 |
CDZ33340.1 | CDZ35191.1 | NGAL_HAMBI1146_03270 | NGAL_HAMBI1146_12430 | Ribosomal protein L11 methyltransferase. | Ribosomal RNA small subunit methyltransferase I. | 0.589 |
CDZ33340.1 | CDZ35862.1 | NGAL_HAMBI1146_03270 | NGAL_HAMBI1146_16050 | Ribosomal protein L11 methyltransferase. | Ribosomal RNA small subunit methyltransferase E. | 0.791 |
CDZ33340.1 | CDZ38418.1 | NGAL_HAMBI1146_03270 | NGAL_HAMBI1146_28750 | Ribosomal protein L11 methyltransferase. | Putative DNAJ chaperone family protein. | 0.575 |
CDZ33340.1 | CDZ40951.1 | NGAL_HAMBI1146_03270 | NGAL_HAMBI1146_41320 | Ribosomal protein L11 methyltransferase. | DnaJ family molecular chaperone. | 0.575 |
CDZ33340.1 | CDZ41911.1 | NGAL_HAMBI1146_03270 | NGAL_HAMBI1146_46740 | Ribosomal protein L11 methyltransferase. | Heat shock protein DnaJ domain protein. | 0.575 |
CDZ33340.1 | CDZ42393.1 | NGAL_HAMBI1146_03270 | NGAL_HAMBI1146_51590 | Ribosomal protein L11 methyltransferase. | Ribosomal RNA large subunit methyltransferase H. | 0.632 |
CDZ33340.1 | CDZ42808.1 | NGAL_HAMBI1146_03270 | NGAL_HAMBI1146_55750 | Ribosomal protein L11 methyltransferase. | 50S ribosomal protein L11. | 0.886 |
CDZ33340.1 | radA | NGAL_HAMBI1146_03270 | NGAL_HAMBI1146_25510 | Ribosomal protein L11 methyltransferase. | DNA repair protein RadA. | 0.662 |
CDZ33518.1 | CDZ33340.1 | NGAL_HAMBI1146_04180 | NGAL_HAMBI1146_03270 | DnaJ family molecular chaperone. | Ribosomal protein L11 methyltransferase. | 0.575 |
CDZ33518.1 | CDZ35862.1 | NGAL_HAMBI1146_04180 | NGAL_HAMBI1146_16050 | DnaJ family molecular chaperone. | Ribosomal RNA small subunit methyltransferase E. | 0.410 |
CDZ33518.1 | CDZ42808.1 | NGAL_HAMBI1146_04180 | NGAL_HAMBI1146_55750 | DnaJ family molecular chaperone. | 50S ribosomal protein L11. | 0.601 |
CDZ35191.1 | CDZ33340.1 | NGAL_HAMBI1146_12430 | NGAL_HAMBI1146_03270 | Ribosomal RNA small subunit methyltransferase I. | Ribosomal protein L11 methyltransferase. | 0.589 |
CDZ35191.1 | CDZ35862.1 | NGAL_HAMBI1146_12430 | NGAL_HAMBI1146_16050 | Ribosomal RNA small subunit methyltransferase I. | Ribosomal RNA small subunit methyltransferase E. | 0.458 |
CDZ35191.1 | CDZ42393.1 | NGAL_HAMBI1146_12430 | NGAL_HAMBI1146_51590 | Ribosomal RNA small subunit methyltransferase I. | Ribosomal RNA large subunit methyltransferase H. | 0.544 |
CDZ35862.1 | CDZ33340.1 | NGAL_HAMBI1146_16050 | NGAL_HAMBI1146_03270 | Ribosomal RNA small subunit methyltransferase E. | Ribosomal protein L11 methyltransferase. | 0.791 |
CDZ35862.1 | CDZ33518.1 | NGAL_HAMBI1146_16050 | NGAL_HAMBI1146_04180 | Ribosomal RNA small subunit methyltransferase E. | DnaJ family molecular chaperone. | 0.410 |
CDZ35862.1 | CDZ35191.1 | NGAL_HAMBI1146_16050 | NGAL_HAMBI1146_12430 | Ribosomal RNA small subunit methyltransferase E. | Ribosomal RNA small subunit methyltransferase I. | 0.458 |
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