STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ33340.1Ribosomal protein L11 methyltransferase. (292 aa)    
Predicted Functional Partners:
CDZ42808.1
50S ribosomal protein L11.
    
 
 0.886
CDZ35862.1
Ribosomal RNA small subunit methyltransferase E.
 
  
 0.791
CDZ33338.1
Electron transport protein SCO1/SenC.
 
     0.664
radA
DNA repair protein RadA.
 
     0.662
CDZ42393.1
Ribosomal RNA large subunit methyltransferase H.
 
   
 0.632
CDZ35191.1
Ribosomal RNA small subunit methyltransferase I.
 
  
 0.589
CDZ33518.1
DnaJ family molecular chaperone.
  
  
 0.575
CDZ38418.1
Putative DNAJ chaperone family protein.
  
  
 0.575
CDZ40951.1
DnaJ family molecular chaperone.
  
  
 0.575
CDZ41911.1
Heat shock protein DnaJ domain protein.
  
  
 0.575
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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