STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ33888.1Putative macrolide efflux ABC transporter, ATP-binding protein. (238 aa)    
Predicted Functional Partners:
CDZ33890.1
ABC-type antimicrobial peptide transport system, permease component.
 
 0.997
macA
Macrolide-specific efflux protein MacA.
 
 
 0.961
CDZ42927.1
Lipoprotein releasing system, transmembrane protein, LolC/E family.
  
 
 0.772
CDZ41850.1
ABC-type antimicrobial peptide transport system permease component.
  
 
 0.755
lolA
Outer membrane lipoprotein carrier protein LolA.
   
 
 0.605
CDZ38375.1
NolF secretion protein.
 
 
 0.568
CDZ40554.1
Putative efflux transporter, membrane fusion protein subunit; putative HlyD family secretion protein.
 
 
 0.524
CDZ36351.1
Efflux transporter, RND family, MFP subunit.
 
 
 0.500
CDZ33892.1
GntR family regulatory protein 10.
       0.497
mexE
Multidrug efflux RND membrane fusion protein MexE.
 
 
 0.492
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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