STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ34661.1Dihydrodipicolinate synthase. (293 aa)    
Predicted Functional Partners:
CDZ42070.1
Dihydrodipicolinate reductase.
 
  
 0.777
CDZ42589.1
Dihydrodipicolinate reductase.
 
  
 0.769
CDZ35020.1
Dihydrodipicolinate synthase.
  
     0.764
gsiC-4
Glutathione ABC transporter permease GsiC.
 
     0.715
nikC
Nickel ABC transporter, permease subunit NikC.
 
     0.712
CDZ34642.1
Type III effector Hrp-dependent outer protein.
 
     0.708
CDZ32968.1
Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
  
     0.695
gsiA-2
Glutathione ABC transporter, ATP-binding protein GsiA.
       0.689
CDZ34650.1
Putative neuraminidase (Sialidase).
 
     0.609
CDZ41935.1
Diaminopimelate decarboxylase.
  
 0.560
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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