STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ35111.1Hypothetical protein. (78 aa)    
Predicted Functional Partners:
CDZ35112.1
Hypothetical protein.
 
    0.882
CDZ35110.1
Phenylalanine--tRNA ligase alpha subunit.
       0.753
CDZ35114.1
Phenylalanine--tRNA ligase beta subunit.
       0.723
CDZ42073.1
Protein of hypothetical function DUF497.
  
     0.581
CDZ33676.1
Hypothetical protein.
  
     0.563
CDZ39096.1
Hypothetical protein.
  
     0.563
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
       0.475
CDZ43146.1
Hypothetical protein.
 
    0.434
CDZ43129.1
Hypothetical protein.
 
     0.423
CDZ35856.1
Hypothetical protein.
  
     0.420
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.