STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ35454.1GcrA cell cycle regulator. (178 aa)    
Predicted Functional Partners:
CDZ38418.1
Putative DNAJ chaperone family protein.
  
   
 0.762
rpoD
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
  
 
 
 0.731
CDZ41127.1
F0F1-type ATP synthase, beta subunit.
  
     0.717
babI
Modification methylase BabI.
 
   
 0.688
CDZ40442.1
RNA polymerase sigma factor.
  
 
 
 0.651
CDZ39209.1
Mll2675 protein.
  
     0.647
CDZ40479.1
Flag1 protein.
  
     0.637
CDZ33379.1
Hypothetical protein.
  
   
 0.629
CDZ41913.1
Cobaltochelatase, CobT subunit.
  
     0.620
CDZ41838.1
TIGR02300 family protein.
  
     0.613
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.