STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ35585.1CDP-glucose 4,6-dehydratase. (360 aa)    
Predicted Functional Partners:
CDZ35586.1
Glucose-1-phosphate cytidylyltransferase.
 
 0.996
CDZ35581.1
NDP-hexose 3-C-methyltransferase TylCIII.
 
   
 0.952
cpsJ
Polysaccharide capsule synthesis protein CpsJ.
 
     0.947
CDZ35574.1
Cephalosporin hydroxylase.
 
     0.946
CDZ35576.1
Putative NDP-hexose 3-C-methyltransferase protein.
 
   
 0.945
CDZ35583.1
StrX protein.
 
  
 0.889
ExoN
UTP--glucose-1-phosphate uridylyltransferase.
  
 
 0.815
CDZ36705.1
UTP--glucose-1-phosphate uridylyltransferase.
  
 
 0.815
CDZ35206.1
Alpha,alpha-trehalose-phosphate synthase (UDP-forming).
     
  0.800
CDZ35588.1
Glycosyltransferase.
 
 
 0.723
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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