Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDZ36280.1 | CDZ36305.1 | NGAL_HAMBI1146_17830 | NGAL_HAMBI1146_17970 | 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase. | Starch synthase. | 0.741 |
CDZ36280.1 | CDZ36627.1 | NGAL_HAMBI1146_17830 | NGAL_HAMBI1146_19780 | 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase. | Starch synthase. | 0.733 |
CDZ36280.1 | CDZ36629.1 | NGAL_HAMBI1146_17830 | NGAL_HAMBI1146_19790 | 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase. | Glucose-1-phosphate adenylyltransferase. | 0.799 |
CDZ36280.1 | CDZ38396.1 | NGAL_HAMBI1146_17830 | NGAL_HAMBI1146_28640 | 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase. | 4-alpha-glucanotransferase (Amylomaltase). | 0.887 |
CDZ36280.1 | CDZ40350.1 | NGAL_HAMBI1146_17830 | NGAL_HAMBI1146_38290 | 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase. | (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase. | 0.949 |
CDZ36280.1 | CDZ40997.1 | NGAL_HAMBI1146_17830 | NGAL_HAMBI1146_41560 | 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase. | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase. | 0.845 |
CDZ36280.1 | CDZ40999.1 | NGAL_HAMBI1146_17830 | NGAL_HAMBI1146_41570 | 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase. | Maltose alpha-D-glucosyltransferase. | 0.843 |
CDZ36280.1 | glgB | NGAL_HAMBI1146_17830 | NGAL_HAMBI1146_19800 | 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase. | 1,4-alpha-glucan branching enzyme GlgB. | 0.423 |
CDZ36280.1 | glgB-2 | NGAL_HAMBI1146_17830 | NGAL_HAMBI1146_41580 | 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase. | 1,4-alpha-glucan branching enzyme GlgB. | 0.433 |
CDZ36280.1 | glgX | NGAL_HAMBI1146_17830 | NGAL_HAMBI1146_17950 | 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase. | Glycogen debranching enzyme GlgX. | 0.743 |
CDZ36305.1 | CDZ36280.1 | NGAL_HAMBI1146_17970 | NGAL_HAMBI1146_17830 | Starch synthase. | 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase. | 0.741 |
CDZ36305.1 | CDZ36629.1 | NGAL_HAMBI1146_17970 | NGAL_HAMBI1146_19790 | Starch synthase. | Glucose-1-phosphate adenylyltransferase. | 0.953 |
CDZ36305.1 | CDZ38396.1 | NGAL_HAMBI1146_17970 | NGAL_HAMBI1146_28640 | Starch synthase. | 4-alpha-glucanotransferase (Amylomaltase). | 0.606 |
CDZ36305.1 | CDZ40999.1 | NGAL_HAMBI1146_17970 | NGAL_HAMBI1146_41570 | Starch synthase. | Maltose alpha-D-glucosyltransferase. | 0.837 |
CDZ36305.1 | glgB | NGAL_HAMBI1146_17970 | NGAL_HAMBI1146_19800 | Starch synthase. | 1,4-alpha-glucan branching enzyme GlgB. | 0.924 |
CDZ36305.1 | glgB-2 | NGAL_HAMBI1146_17970 | NGAL_HAMBI1146_41580 | Starch synthase. | 1,4-alpha-glucan branching enzyme GlgB. | 0.921 |
CDZ36305.1 | glgX | NGAL_HAMBI1146_17970 | NGAL_HAMBI1146_17950 | Starch synthase. | Glycogen debranching enzyme GlgX. | 0.766 |
CDZ36627.1 | CDZ36280.1 | NGAL_HAMBI1146_19780 | NGAL_HAMBI1146_17830 | Starch synthase. | 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase. | 0.733 |
CDZ36627.1 | CDZ36629.1 | NGAL_HAMBI1146_19780 | NGAL_HAMBI1146_19790 | Starch synthase. | Glucose-1-phosphate adenylyltransferase. | 0.989 |
CDZ36627.1 | CDZ38396.1 | NGAL_HAMBI1146_19780 | NGAL_HAMBI1146_28640 | Starch synthase. | 4-alpha-glucanotransferase (Amylomaltase). | 0.591 |
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