STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsiA-3Glutathione ABC transporter, ATP-binding protein GsiA. (570 aa)    
Predicted Functional Partners:
CDZ38276.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
    0.831
appB
Oligopeptide transport system permease protein AppB.
  
    0.800
rspA
Starvation-sensing protein RspA.
       0.775
CDZ38282.1
D-galactonate dehydratase.
       0.681
CDZ38272.1
Periplasmic alpha-galactoside-binding protein.
  
    0.564
cbiQ
ABC-type cobalt transport system, permease component CbiQ.
  
 
 0.524
CDZ37093.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein.
 
  
0.521
CDZ34856.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein.
 
  
0.514
gsiD-3
Glutathione transport system permease protein GsiD.
 
  
 0.482
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.