Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDZ34322.1 | aapQ | NGAL_HAMBI1146_08010 | NGAL_HAMBI1146_30240 | Arginine/ornithine transport ATP-binding protein. | General L-amino acid transport system permease protein AapQ. | 0.551 |
CDZ34322.1 | aotJ-2 | NGAL_HAMBI1146_08010 | NGAL_HAMBI1146_29150 | Arginine/ornithine transport ATP-binding protein. | Arginine/ornithine binding protein AotJ. | 0.755 |
CDZ34322.1 | yhdY | NGAL_HAMBI1146_08010 | NGAL_HAMBI1146_30250 | Arginine/ornithine transport ATP-binding protein. | Inner membrane amino-acid ABC transporter permease protein YhdY. | 0.819 |
CDZ34421.1 | CDZ38742.1 | NGAL_HAMBI1146_08520 | NGAL_HAMBI1146_30230 | General L-amino acid transport ATP-binding subunit. | General L-amino acid-binding periplasmic protein. | 0.760 |
CDZ34421.1 | aapQ | NGAL_HAMBI1146_08520 | NGAL_HAMBI1146_30240 | General L-amino acid transport ATP-binding subunit. | General L-amino acid transport system permease protein AapQ. | 0.813 |
CDZ34421.1 | aotJ-2 | NGAL_HAMBI1146_08520 | NGAL_HAMBI1146_29150 | General L-amino acid transport ATP-binding subunit. | Arginine/ornithine binding protein AotJ. | 0.765 |
CDZ34421.1 | yhdY | NGAL_HAMBI1146_08520 | NGAL_HAMBI1146_30250 | General L-amino acid transport ATP-binding subunit. | Inner membrane amino-acid ABC transporter permease protein YhdY. | 0.885 |
CDZ34705.1 | aapQ | NGAL_HAMBI1146_10130 | NGAL_HAMBI1146_30240 | YckI (ABC transporter YckI). | General L-amino acid transport system permease protein AapQ. | 0.436 |
CDZ34705.1 | aotJ-2 | NGAL_HAMBI1146_10130 | NGAL_HAMBI1146_29150 | YckI (ABC transporter YckI). | Arginine/ornithine binding protein AotJ. | 0.760 |
CDZ34705.1 | yhdY | NGAL_HAMBI1146_10130 | NGAL_HAMBI1146_30250 | YckI (ABC transporter YckI). | Inner membrane amino-acid ABC transporter permease protein YhdY. | 0.760 |
CDZ34980.1 | CDZ38742.1 | NGAL_HAMBI1146_11550 | NGAL_HAMBI1146_30230 | Amino acid ABC transporter, ATP-binding protein. | General L-amino acid-binding periplasmic protein. | 0.460 |
CDZ34980.1 | aapQ | NGAL_HAMBI1146_11550 | NGAL_HAMBI1146_30240 | Amino acid ABC transporter, ATP-binding protein. | General L-amino acid transport system permease protein AapQ. | 0.695 |
CDZ34980.1 | aotJ-2 | NGAL_HAMBI1146_11550 | NGAL_HAMBI1146_29150 | Amino acid ABC transporter, ATP-binding protein. | Arginine/ornithine binding protein AotJ. | 0.788 |
CDZ34980.1 | yhdY | NGAL_HAMBI1146_11550 | NGAL_HAMBI1146_30250 | Amino acid ABC transporter, ATP-binding protein. | Inner membrane amino-acid ABC transporter permease protein YhdY. | 0.863 |
CDZ38742.1 | CDZ34421.1 | NGAL_HAMBI1146_30230 | NGAL_HAMBI1146_08520 | General L-amino acid-binding periplasmic protein. | General L-amino acid transport ATP-binding subunit. | 0.760 |
CDZ38742.1 | CDZ34980.1 | NGAL_HAMBI1146_30230 | NGAL_HAMBI1146_11550 | General L-amino acid-binding periplasmic protein. | Amino acid ABC transporter, ATP-binding protein. | 0.460 |
CDZ38742.1 | CDZ38745.1 | NGAL_HAMBI1146_30230 | NGAL_HAMBI1146_30260 | General L-amino acid-binding periplasmic protein. | General L-amino acid transport ATP-binding subunit. | 0.989 |
CDZ38742.1 | CDZ42594.1 | NGAL_HAMBI1146_30230 | NGAL_HAMBI1146_53610 | General L-amino acid-binding periplasmic protein. | Arginine/ornithine transport ATP-binding protein. | 0.405 |
CDZ38742.1 | aapQ | NGAL_HAMBI1146_30230 | NGAL_HAMBI1146_30240 | General L-amino acid-binding periplasmic protein. | General L-amino acid transport system permease protein AapQ. | 0.990 |
CDZ38742.1 | yhdY | NGAL_HAMBI1146_30230 | NGAL_HAMBI1146_30250 | General L-amino acid-binding periplasmic protein. | Inner membrane amino-acid ABC transporter permease protein YhdY. | 0.991 |
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