STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ39696.1Putative indolepyruvate oxidoreductase subunit B. (515 aa)    
Predicted Functional Partners:
CDZ39695.1
Indolepyruvate ferredoxin oxidoreductase, alpha subunit.
 
 
 0.973
CDZ39733.1
Short chain dehydrogenase family protein 17.
 
   
 0.799
CDZ39704.1
Cyclase family protein.
 
     0.781
CDZ39739.1
Cyclase family protein.
 
     0.778
CDZ39700.1
Transcriptional regulator, MarR family.
 
    0.773
ltp2
Lipid transfer protein or keto acyl-CoA thiolase Ltp2.
 
   
 0.745
CDZ39694.1
Anthraniloyl-CoA monooxygenase.
 
   
 0.723
CDZ39702.1
Phytoene dehydrogenase.
 
     0.716
CDZ39687.1
Putative 4-hydroxybenzoyl-CoA thioesterase.
 
    0.628
CDZ39685.1
Putative translation initiation inhibitor, yjgH family (AbmE).
 
    0.622
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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