STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ39947.1Putative cAMP-dependent kinase protein. (151 aa)    
Predicted Functional Partners:
yycF
Transcriptional regulatory protein YycF.
  
 
 0.823
CDZ34589.1
Adenylate/guanylate cyclase with Chase sensor.
 
 0.759
rpoD
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
 
 0.743
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.722
CDZ42804.1
DNA-directed RNA polymerase, beta subunit.
   
 
 0.697
CDZ42803.1
DNA-directed RNA polymerase, beta' subunit.
    
 
 0.648
CDZ37653.1
DNA-directed RNA polymerase, omega subunit.
    
 
 0.628
CDZ34640.1
GAF sensor hybrid histidine kinase.
  
 
 0.614
CDZ37677.1
PAS domain-containing protein.
  
 
 0.612
CDZ33729.1
Putative sensor histidine kinase with multiple PAS and a response regulator receiver domain (Modular protein).
 
 
 0.593
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.