STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccmBHeme exporter protein CcmB. (219 aa)    
Predicted Functional Partners:
ccmC
Heme exporter protein CcmC.
 
 0.998
ccmA
Cytochrome c biogenesis ATP-binding export protein CcmA.
 
 0.994
CDZ40002.1
Thiol:disulfide oxidoreductase, DsbE family.
 
  
 0.923
ccmE
Cytochrome c-type biogenesis protein CcmE.
 
 
 0.920
ccmF
Cytochrome c-type biogenesis protein CcmF.
 
  
 0.855
cycL
Cytochrome c-type biogenesis protein CycL.
 
   
 0.833
cycH
Cytochrome c-type biogenesis protein CycH.
 
   
 0.699
CDZ40003.1
Hypothetical protein.
       0.597
hspH
Small heat shock protein HspH.
  
     0.480
CDZ33739.1
Ferric uptake regulator family protein.
 
   
 0.454
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.