STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fixINitrogen fixation protein FixI. (763 aa)    
Predicted Functional Partners:
CDZ41688.1
Hypothetical protein.
 
  
 0.942
ccoG
Cytochrome c oxidase accessory protein CcoG.
 
  
 0.939
fixH
Nitrogen fixation protein FixH.
 
  
 0.884
CDZ41680.1
Cbb3-type cytochrome c oxidase subunit.
 
   
 0.878
CDZ41677.1
Cytochrome c oxidase, cbb3-type, subunit II.
 
   
 0.868
CDZ41676.1
Cytochrome c oxidase, cbb3-type, subunit I.
 
   
 0.852
CDZ37483.1
Heavy metal translocating P-type ATPase.
 
 
0.722
CDZ37485.1
Hypothetical protein.
  
 
 0.662
CDZ41678.1
Hypothetical protein.
 
   
 0.656
CDZ42534.1
Putative copper export protein.
     
 0.488
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.