STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ42046.1Basic membrane lipoprotein. (330 aa)    
Predicted Functional Partners:
CDZ42045.1
Putative carbohydrate transport ATP-binding protein.
 
 
 0.988
CDZ42043.1
Putative ABC-type transport system, permease component.
 
 
 0.982
CDZ42044.1
Inner-membrane translocator.
 
 
 0.982
CDZ33874.1
ATPase component of uncharacterized ABC-type transporter.
 
 
 0.970
CDZ33872.1
Inner-membrane translocator.
 
 
 0.966
CDZ33142.1
Ribose ABC transporter ATP-binding.
 
 
 0.960
CDZ33148.1
Putative ABC-type transport system, permease component.
 
 
 0.959
CDZ33150.1
Inner-membrane translocator.
 
 
 0.958
CDZ33871.1
Basic membrane lipoprotein.
  
 
 
0.925
CDZ33152.1
Bmp family protein.
  
 
 
0.915
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.