STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YddRGlutathione ABC transporter, permease protein. (307 aa)    
Predicted Functional Partners:
appC-3
Oligopeptide transport system permease protein AppC.
    0.954
gsiD-3
Glutathione transport system permease protein GsiD.
 
 0.873
CDZ42185.1
Peptidase M14 carboxypeptidase A.
 
     0.868
CDZ42188.1
ABC-type dipeptide transport system, periplasmic component.
 
   0.868
CDZ43029.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
    0.794
CDZ37233.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
    0.792
CDZ42480.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
    0.788
yddQ-2
YddQ.
 
    0.784
yddQ
Inner membrane ABC transporter permease protein YddQ.
  
    0.779
CDZ39718.1
Dipeptide transport system permease protein.
 
    0.769
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.