Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDZ33739.1 | CDZ36700.1 | NGAL_HAMBI1146_05290 | NGAL_HAMBI1146_20160 | Ferric uptake regulator family protein. | Glutamate synthase, large subunit. | 0.523 |
CDZ33739.1 | CDZ42272.1 | NGAL_HAMBI1146_05290 | NGAL_HAMBI1146_50380 | Ferric uptake regulator family protein. | Hypothetical protein. | 0.655 |
CDZ33739.1 | lsfA | NGAL_HAMBI1146_05290 | NGAL_HAMBI1146_08250 | Ferric uptake regulator family protein. | Antioxidant protein LsfA. | 0.597 |
CDZ34488.1 | CDZ42272.1 | NGAL_HAMBI1146_09100 | NGAL_HAMBI1146_50380 | Hypothetical protein. | Hypothetical protein. | 0.499 |
CDZ36700.1 | CDZ33739.1 | NGAL_HAMBI1146_20160 | NGAL_HAMBI1146_05290 | Glutamate synthase, large subunit. | Ferric uptake regulator family protein. | 0.523 |
CDZ36700.1 | CDZ41776.1 | NGAL_HAMBI1146_20160 | NGAL_HAMBI1146_45560 | Glutamate synthase, large subunit. | Iron response regulator. | 0.523 |
CDZ36700.1 | CDZ42272.1 | NGAL_HAMBI1146_20160 | NGAL_HAMBI1146_50380 | Glutamate synthase, large subunit. | Hypothetical protein. | 0.414 |
CDZ36700.1 | fur | NGAL_HAMBI1146_20160 | NGAL_HAMBI1146_13090 | Glutamate synthase, large subunit. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.523 |
CDZ36700.1 | lsfA | NGAL_HAMBI1146_20160 | NGAL_HAMBI1146_08250 | Glutamate synthase, large subunit. | Antioxidant protein LsfA. | 0.447 |
CDZ41776.1 | CDZ36700.1 | NGAL_HAMBI1146_45560 | NGAL_HAMBI1146_20160 | Iron response regulator. | Glutamate synthase, large subunit. | 0.523 |
CDZ41776.1 | CDZ42272.1 | NGAL_HAMBI1146_45560 | NGAL_HAMBI1146_50380 | Iron response regulator. | Hypothetical protein. | 0.655 |
CDZ41776.1 | lsfA | NGAL_HAMBI1146_45560 | NGAL_HAMBI1146_08250 | Iron response regulator. | Antioxidant protein LsfA. | 0.597 |
CDZ42272.1 | CDZ33739.1 | NGAL_HAMBI1146_50380 | NGAL_HAMBI1146_05290 | Hypothetical protein. | Ferric uptake regulator family protein. | 0.655 |
CDZ42272.1 | CDZ34488.1 | NGAL_HAMBI1146_50380 | NGAL_HAMBI1146_09100 | Hypothetical protein. | Hypothetical protein. | 0.499 |
CDZ42272.1 | CDZ36700.1 | NGAL_HAMBI1146_50380 | NGAL_HAMBI1146_20160 | Hypothetical protein. | Glutamate synthase, large subunit. | 0.414 |
CDZ42272.1 | CDZ41776.1 | NGAL_HAMBI1146_50380 | NGAL_HAMBI1146_45560 | Hypothetical protein. | Iron response regulator. | 0.655 |
CDZ42272.1 | fur | NGAL_HAMBI1146_50380 | NGAL_HAMBI1146_13090 | Hypothetical protein. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.655 |
CDZ42272.1 | lsfA | NGAL_HAMBI1146_50380 | NGAL_HAMBI1146_08250 | Hypothetical protein. | Antioxidant protein LsfA. | 0.706 |
fur | CDZ36700.1 | NGAL_HAMBI1146_13090 | NGAL_HAMBI1146_20160 | Ferric uptake regulation protein; Belongs to the Fur family. | Glutamate synthase, large subunit. | 0.523 |
fur | CDZ42272.1 | NGAL_HAMBI1146_13090 | NGAL_HAMBI1146_50380 | Ferric uptake regulation protein; Belongs to the Fur family. | Hypothetical protein. | 0.655 |
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