Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AdhC | CDZ34715.1 | NGAL_HAMBI1146_06190 | NGAL_HAMBI1146_10180 | NADP-dependent alcohol dehydrogenase. | Long-chain-fatty-acid--CoA ligase. | 0.515 |
AdhC | CDZ42353.1 | NGAL_HAMBI1146_06190 | NGAL_HAMBI1146_51190 | NADP-dependent alcohol dehydrogenase. | NADH-dependent flavin oxidoreductase, Oye. | 0.400 |
CDZ34715.1 | AdhC | NGAL_HAMBI1146_10180 | NGAL_HAMBI1146_06190 | Long-chain-fatty-acid--CoA ligase. | NADP-dependent alcohol dehydrogenase. | 0.515 |
CDZ34715.1 | CDZ41941.1 | NGAL_HAMBI1146_10180 | NGAL_HAMBI1146_47040 | Long-chain-fatty-acid--CoA ligase. | Electron transfer flavoprotein, beta subunit. | 0.595 |
CDZ34715.1 | CDZ42353.1 | NGAL_HAMBI1146_10180 | NGAL_HAMBI1146_51190 | Long-chain-fatty-acid--CoA ligase. | NADH-dependent flavin oxidoreductase, Oye. | 0.553 |
CDZ34715.1 | fixA | NGAL_HAMBI1146_10180 | NGAL_HAMBI1146_60340 | Long-chain-fatty-acid--CoA ligase. | Electron transfer flavoprotein, beta subunit FixA. | 0.595 |
CDZ41941.1 | CDZ34715.1 | NGAL_HAMBI1146_47040 | NGAL_HAMBI1146_10180 | Electron transfer flavoprotein, beta subunit. | Long-chain-fatty-acid--CoA ligase. | 0.595 |
CDZ41941.1 | CDZ42353.1 | NGAL_HAMBI1146_47040 | NGAL_HAMBI1146_51190 | Electron transfer flavoprotein, beta subunit. | NADH-dependent flavin oxidoreductase, Oye. | 0.433 |
CDZ42353.1 | AdhC | NGAL_HAMBI1146_51190 | NGAL_HAMBI1146_06190 | NADH-dependent flavin oxidoreductase, Oye. | NADP-dependent alcohol dehydrogenase. | 0.400 |
CDZ42353.1 | CDZ34715.1 | NGAL_HAMBI1146_51190 | NGAL_HAMBI1146_10180 | NADH-dependent flavin oxidoreductase, Oye. | Long-chain-fatty-acid--CoA ligase. | 0.553 |
CDZ42353.1 | CDZ41941.1 | NGAL_HAMBI1146_51190 | NGAL_HAMBI1146_47040 | NADH-dependent flavin oxidoreductase, Oye. | Electron transfer flavoprotein, beta subunit. | 0.433 |
CDZ42353.1 | CDZ42354.1 | NGAL_HAMBI1146_51190 | NGAL_HAMBI1146_51200 | NADH-dependent flavin oxidoreductase, Oye. | Putative transcriptional regulator. | 0.558 |
CDZ42353.1 | fixA | NGAL_HAMBI1146_51190 | NGAL_HAMBI1146_60340 | NADH-dependent flavin oxidoreductase, Oye. | Electron transfer flavoprotein, beta subunit FixA. | 0.433 |
CDZ42354.1 | CDZ42353.1 | NGAL_HAMBI1146_51200 | NGAL_HAMBI1146_51190 | Putative transcriptional regulator. | NADH-dependent flavin oxidoreductase, Oye. | 0.558 |
fixA | CDZ34715.1 | NGAL_HAMBI1146_60340 | NGAL_HAMBI1146_10180 | Electron transfer flavoprotein, beta subunit FixA. | Long-chain-fatty-acid--CoA ligase. | 0.595 |
fixA | CDZ42353.1 | NGAL_HAMBI1146_60340 | NGAL_HAMBI1146_51190 | Electron transfer flavoprotein, beta subunit FixA. | NADH-dependent flavin oxidoreductase, Oye. | 0.433 |