STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ42825.13-dehydroquinate dehydratase. (145 aa)    
Predicted Functional Partners:
CDZ41908.1
3-dehydroquinate synthase.
 
 0.975
CDZ42826.1
Acetyl-CoA carboxylase, biotin carboxyl carrier protein.
  
  
 0.755
CDZ42828.1
Leucyltransferase, partial CDS.
 
   
 0.745
CDZ42827.1
Acetyl-CoA carboxylase, biotin carboxylase subunit.
  
  
 0.709
CDZ43287.1
Shikimate dehydrogenase.
 
 
 0.666
CDZ38825.1
Trigger factor.
  
  
 0.560
CDZ33577.1
Protein translocase, SecG subunit.
  
    0.538
CDZ42824.1
27kDa outer membrane protein.
     
 0.536
CDZ39334.1
Anthranilate synthase.
     
 0.530
CDZ42848.1
50S ribosomal protein L13.
  
    0.416
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.