STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ42907.1Aspartate carbamoyltransferase. (313 aa)    
Predicted Functional Partners:
CDZ39102.1
Carbamoyl-phosphate synthase small chain.
 
 0.999
CDZ39130.1
Carbamoyl-phosphate synthase large chain.
 
 0.999
CDZ42908.1
Dihydroorotase.
 0.999
CDZ35395.1
Dihydroorotase.
  
 
 0.979
CDZ35187.1
Orotidine 5'-phosphate decarboxylase.
 
  
 0.969
CDZ40437.1
Adenylosuccinate synthetase 2.
 
 
 0.966
CDZ35399.1
Orotate phosphoribosyltransferase.
 
  
 0.960
CDZ40570.1
Dihydropyrimidinase.
 
 0.952
CDZ39177.1
Aspartate transaminase.
 
  
  0.914
CDZ40027.1
Argininosuccinate synthase.
  
 
 0.911
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.