STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ42987.1Tryptophan synthase alpha chain. (279 aa)    
Predicted Functional Partners:
CDZ42988.1
Tryptophan synthase beta chain.
 0.999
CDZ42989.1
Phosphoribosylanthranilate isomerase.
  
 0.998
CDZ33557.1
Indole-3-glycerol phosphate synthase.
 
 
 0.994
CDZ33555.1
Anthranilate phosphoribosyltransferase.
 
  
 0.988
CDZ39334.1
Anthranilate synthase.
 
  
 0.985
CDZ40153.1
Aminodeoxychorismate synthase, component I.
 
  
 0.942
CDZ40963.1
Chorismate synthase.
 
  
 0.827
CDZ39211.1
Prolipoprotein diacylglyceryl transferase.
  
    0.814
CDZ42986.1
Acetyl-CoA carboxylase, carboxyl transferase, beta subunit.
     
 0.745
folC
Bifunctional protein FolC.
     
 0.698
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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