STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ42996.1DNA-binding helix-turn-helix protein. (121 aa)    
Predicted Functional Partners:
CDZ42999.1
Import inner membrane translocase subunit Tim44, partial CDS.
 
     0.835
CDZ42997.1
Smr protein/MutS2.
 
     0.823
CDZ42998.1
MltA domain protein.
     
 0.801
CDZ42020.1
Transcriptional regulator, MarR family.
  
   0.620
CDZ37963.1
Ubiquinol-cytochrome C chaperone.
  
     0.588
CDZ42995.1
DNA gyrase, B subunit.
     
 0.512
CDZ43292.1
Hypothetical protein, partial CDS.
 
     0.478
CDZ43276.1
DNA polymerase III, delta subunit.
  
     0.447
CDZ40075.1
Methyltransferase-like protein 20.
  
     0.446
CDZ39889.1
Peptidase M48 Ste24p.
  
     0.440
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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