Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDZ37963.1 | CDZ42020.1 | NGAL_HAMBI1146_26470 | NGAL_HAMBI1146_47850 | Ubiquinol-cytochrome C chaperone. | Transcriptional regulator, MarR family. | 0.442 |
CDZ37963.1 | CDZ42996.1 | NGAL_HAMBI1146_26470 | NGAL_HAMBI1146_57690 | Ubiquinol-cytochrome C chaperone. | DNA-binding helix-turn-helix protein. | 0.588 |
CDZ39889.1 | CDZ42996.1 | NGAL_HAMBI1146_35950 | NGAL_HAMBI1146_57690 | Peptidase M48 Ste24p. | DNA-binding helix-turn-helix protein. | 0.440 |
CDZ39889.1 | CDZ43276.1 | NGAL_HAMBI1146_35950 | NGAL_HAMBI1146_60490 | Peptidase M48 Ste24p. | DNA polymerase III, delta subunit. | 0.547 |
CDZ39889.1 | CDZ43292.1 | NGAL_HAMBI1146_35950 | NGAL_HAMBI1146_60650 | Peptidase M48 Ste24p. | Hypothetical protein, partial CDS. | 0.634 |
CDZ40075.1 | CDZ42996.1 | NGAL_HAMBI1146_37000 | NGAL_HAMBI1146_57690 | Methyltransferase-like protein 20. | DNA-binding helix-turn-helix protein. | 0.446 |
CDZ42020.1 | CDZ37963.1 | NGAL_HAMBI1146_47850 | NGAL_HAMBI1146_26470 | Transcriptional regulator, MarR family. | Ubiquinol-cytochrome C chaperone. | 0.442 |
CDZ42020.1 | CDZ42996.1 | NGAL_HAMBI1146_47850 | NGAL_HAMBI1146_57690 | Transcriptional regulator, MarR family. | DNA-binding helix-turn-helix protein. | 0.620 |
CDZ42995.1 | CDZ42996.1 | NGAL_HAMBI1146_57680 | NGAL_HAMBI1146_57690 | DNA gyrase, B subunit. | DNA-binding helix-turn-helix protein. | 0.512 |
CDZ42995.1 | CDZ42997.1 | NGAL_HAMBI1146_57680 | NGAL_HAMBI1146_57700 | DNA gyrase, B subunit. | Smr protein/MutS2. | 0.498 |
CDZ42995.1 | CDZ42998.1 | NGAL_HAMBI1146_57680 | NGAL_HAMBI1146_57710 | DNA gyrase, B subunit. | MltA domain protein. | 0.497 |
CDZ42995.1 | CDZ42999.1 | NGAL_HAMBI1146_57680 | NGAL_HAMBI1146_57720 | DNA gyrase, B subunit. | Import inner membrane translocase subunit Tim44, partial CDS. | 0.572 |
CDZ42996.1 | CDZ37963.1 | NGAL_HAMBI1146_57690 | NGAL_HAMBI1146_26470 | DNA-binding helix-turn-helix protein. | Ubiquinol-cytochrome C chaperone. | 0.588 |
CDZ42996.1 | CDZ39889.1 | NGAL_HAMBI1146_57690 | NGAL_HAMBI1146_35950 | DNA-binding helix-turn-helix protein. | Peptidase M48 Ste24p. | 0.440 |
CDZ42996.1 | CDZ40075.1 | NGAL_HAMBI1146_57690 | NGAL_HAMBI1146_37000 | DNA-binding helix-turn-helix protein. | Methyltransferase-like protein 20. | 0.446 |
CDZ42996.1 | CDZ42020.1 | NGAL_HAMBI1146_57690 | NGAL_HAMBI1146_47850 | DNA-binding helix-turn-helix protein. | Transcriptional regulator, MarR family. | 0.620 |
CDZ42996.1 | CDZ42995.1 | NGAL_HAMBI1146_57690 | NGAL_HAMBI1146_57680 | DNA-binding helix-turn-helix protein. | DNA gyrase, B subunit. | 0.512 |
CDZ42996.1 | CDZ42997.1 | NGAL_HAMBI1146_57690 | NGAL_HAMBI1146_57700 | DNA-binding helix-turn-helix protein. | Smr protein/MutS2. | 0.823 |
CDZ42996.1 | CDZ42998.1 | NGAL_HAMBI1146_57690 | NGAL_HAMBI1146_57710 | DNA-binding helix-turn-helix protein. | MltA domain protein. | 0.801 |
CDZ42996.1 | CDZ42999.1 | NGAL_HAMBI1146_57690 | NGAL_HAMBI1146_57720 | DNA-binding helix-turn-helix protein. | Import inner membrane translocase subunit Tim44, partial CDS. | 0.835 |
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