STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ43026.1Transcriptional regulator protein, LysR family (Possibly activator of the expression of chvE protein). (299 aa)    
Predicted Functional Partners:
CDZ36424.1
Transcriptional regulator, LysR family.
  
     0.772
CDZ43034.1
Positive regulator for lys.
  
     0.772
CDZ40425.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.769
dgdR
HTH-type transcriptional regulator DgdR.
  
     0.763
CDZ33354.1
Transcriptional regulator, LysR family.
  
     0.762
ptxR
Transcriptional regulator PtxR.
  
     0.758
CDZ41347.1
Transcriptional regulator, LysR family.
  
     0.752
dgdR-3
HTH-type transcriptional regulator DgdR.
  
     0.747
CDZ39517.1
GcvA transcriptional dual regulator.
  
     0.742
gcvA
DNA-binding transcriptional activator GcvA.
  
     0.741
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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