STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ43336.1Peptidase C39 family protein. (373 aa)    
Predicted Functional Partners:
CDZ43337.1
Peptidase M10 serralysin, partial CDS.
 
  
 0.933
CDZ34601.1
FAD-binding 9 siderophore-interacting domain protein.
   
   0.919
CDZ38246.1
Type I secretion membrane fusion protein, HlyD family.
 
 
 0.904
CDZ35984.1
Type I secretion membrane fusion protein, HlyD family.
 
 
 0.903
CDZ42571.1
Type I secretion membrane fusion protein, HlyD family.
 
 
 0.901
CDZ34930.1
Type I secretion membrane fusion protein, HlyD family.
 
 
 0.900
CDZ43353.1
Putative calcium-binding protein, partial CDS.
 
  
 0.839
CDZ43358.1
Putative calcium-binding protein, partial CDS.
 
  
 0.828
CDZ37376.1
Hemolysin transport protein.
 
  
 0.822
CDZ38244.1
Hemolysin-type calcium-binding region.
 
  
 0.817
Your Current Organism:
Neorhizobium galegae officinalis
NCBI taxonomy Id: 323656
Other names: N. galegae bv. officinalis, Neorhizobium galegae biovar officinalis, Neorhizobium galegae bv. officinalis, Rhizobium galegae biovar officinalis, Rhizobium galegae bv. officinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.