STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB73551.1Lipopolysaccharide biosynthesis. (463 aa)    
Predicted Functional Partners:
ABB73550.1
Polysaccharide export protein.
 
 
 0.994
ABB73552.1
Protein-tyrosine kinase.
  
 0.993
ABB73547.1
Sugar transferase.
 
  
 0.974
ABB75818.1
Polysaccharide export protein.
 
 
 0.966
ABB75960.1
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.930
ABB73549.1
Hypothetical protein.
 
    0.926
ABB73554.1
Membrane protein, putative.
 
     0.804
ABB75816.1
Capsular polysaccharide biosynthesis-like protein.
 
  
 0.670
ABB73556.1
Hypothetical protein.
 
  
 0.578
ABB75817.1
Lipopolysaccharide biosynthesis.
  
     0.578
Your Current Organism:
Nitrosospira multiformis
NCBI taxonomy Id: 323848
Other names: N. multiformis ATCC 25196, Nitrosospira multiformis ATCC 25196, Nitrosospira multiformis C-71, Nitrosospira multiformis NCIMB 11849, Nitrosospira multiformis NI13, Nitrosospira multiformis str. ATCC 25196, Nitrosospira multiformis strain ATCC 25196
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