STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB73658.1Cyclase/dehydrase. (230 aa)    
Predicted Functional Partners:
ABB73449.1
Hypothetical protein.
  
     0.736
ABB73725.1
Hypothetical protein.
  
     0.614
ABB73732.1
Hypothetical protein.
  
     0.606
ABB73659.1
Protein of unknown function UPF0060.
       0.584
ABB75752.1
Protein of unknown function DUF1080.
  
     0.578
ABB75303.1
Hypothetical protein.
  
     0.572
ABB75728.1
Hypothetical protein.
  
     0.564
ABB73657.1
Phosphatidylethanolamine N-methyltransferase.
       0.561
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.550
ABB75683.1
Ferroxidase.
  
     0.528
Your Current Organism:
Nitrosospira multiformis
NCBI taxonomy Id: 323848
Other names: N. multiformis ATCC 25196, Nitrosospira multiformis ATCC 25196, Nitrosospira multiformis C-71, Nitrosospira multiformis NCIMB 11849, Nitrosospira multiformis NI13, Nitrosospira multiformis str. ATCC 25196, Nitrosospira multiformis strain ATCC 25196
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