STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB73996.1Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (411 aa)    
Predicted Functional Partners:
ABB74154.1
Hydrophobe/amphiphile efflux-1 HAE1.
  0.985
ABB73997.1
RND efflux system, outer membrane lipoprotein, NodT.
  0.983
ABB73995.1
Hydrophobe/amphiphile efflux-1 HAE1.
   0.968
ABB74155.1
RND efflux system, outer membrane lipoprotein, NodT.
 
  0.960
ABB75135.1
RND efflux system, outer membrane lipoprotein, NodT.
 
  0.943
ABB75024.1
RND efflux system, outer membrane lipoprotein, NodT.
  0.940
ABB75575.1
Type I secretion outer membrane protein, TolC.
  
  0.933
ABB73998.1
Hydrophobe/amphiphile efflux-1 HAE1.
   0.930
ABB73352.1
Hydrophobe/amphiphile efflux-1 HAE1.
 
   0.850
ABB75025.1
Hydrophobe/amphiphile efflux-1 HAE1.
   0.849
Your Current Organism:
Nitrosospira multiformis
NCBI taxonomy Id: 323848
Other names: N. multiformis ATCC 25196, Nitrosospira multiformis ATCC 25196, Nitrosospira multiformis C-71, Nitrosospira multiformis NCIMB 11849, Nitrosospira multiformis NI13, Nitrosospira multiformis str. ATCC 25196, Nitrosospira multiformis strain ATCC 25196
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