Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB74354.1 | ABB74355.1 | Nmul_A1051 | Nmul_A1052 | RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | Conserved hypothetical protein. | 0.840 |
ABB74354.1 | ABB74356.1 | Nmul_A1051 | Nmul_A1053 | RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.961 |
ABB74354.1 | ABB74357.1 | Nmul_A1051 | Nmul_A1054 | RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | RDD protein. | 0.569 |
ABB74355.1 | ABB74354.1 | Nmul_A1052 | Nmul_A1051 | Conserved hypothetical protein. | RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.840 |
ABB74355.1 | ABB74356.1 | Nmul_A1052 | Nmul_A1053 | Conserved hypothetical protein. | Hypothetical protein. | 0.799 |
ABB74355.1 | ABB74357.1 | Nmul_A1052 | Nmul_A1054 | Conserved hypothetical protein. | RDD protein. | 0.569 |
ABB74356.1 | ABB74354.1 | Nmul_A1053 | Nmul_A1051 | Hypothetical protein. | RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.961 |
ABB74356.1 | ABB74355.1 | Nmul_A1053 | Nmul_A1052 | Hypothetical protein. | Conserved hypothetical protein. | 0.799 |
ABB74356.1 | ABB74357.1 | Nmul_A1053 | Nmul_A1054 | Hypothetical protein. | RDD protein. | 0.596 |
ABB74357.1 | ABB74354.1 | Nmul_A1054 | Nmul_A1051 | RDD protein. | RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.569 |
ABB74357.1 | ABB74355.1 | Nmul_A1054 | Nmul_A1052 | RDD protein. | Conserved hypothetical protein. | 0.569 |
ABB74357.1 | ABB74356.1 | Nmul_A1054 | Nmul_A1053 | RDD protein. | Hypothetical protein. | 0.596 |