STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB74497.1CsbD-like protein; Belongs to the UPF0337 (CsbD) family. (72 aa)    
Predicted Functional Partners:
ABB74498.1
Hypothetical protein; Transport-associated.
 
    0.851
ABB74496.1
Hypothetical protein; Transport-associated.
 
    0.847
ABB74500.1
Conserved hypothetical protein.
  
    0.749
ABB75468.1
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein.
  
    0.723
ABB74947.1
Hypothetical protein; Transport-associated.
  
    0.604
ABB75541.1
Protein of unknown function DUF1458.
   
    0.567
ABB73605.1
Glycosyl transferase, family 2.
   
    0.552
ABB74733.1
Glycosyl transferase, family 2.
   
    0.552
ABB74527.1
Conserved hypothetical protein.
   
    0.463
ABB73402.1
Hypothetical protein; Transport-associated.
 
    0.457
Your Current Organism:
Nitrosospira multiformis
NCBI taxonomy Id: 323848
Other names: N. multiformis ATCC 25196, Nitrosospira multiformis ATCC 25196, Nitrosospira multiformis C-71, Nitrosospira multiformis NCIMB 11849, Nitrosospira multiformis NI13, Nitrosospira multiformis str. ATCC 25196, Nitrosospira multiformis strain ATCC 25196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.