Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB74525.1 | ABB74686.1 | Nmul_A1222 | Nmul_A1383 | Von Willebrand factor, type A. | Hypothetical protein. | 0.639 |
ABB74685.1 | ABB74686.1 | Nmul_A1382 | Nmul_A1383 | Phage integrase; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.872 |
ABB74685.1 | ABB75731.1 | Nmul_A1382 | Nmul_A2442 | Phage integrase; Belongs to the 'phage' integrase family. | Conserved hypothetical protein. | 0.486 |
ABB74685.1 | polA | Nmul_A1382 | Nmul_A0568 | Phage integrase; Belongs to the 'phage' integrase family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.425 |
ABB74686.1 | ABB74525.1 | Nmul_A1383 | Nmul_A1222 | Hypothetical protein. | Von Willebrand factor, type A. | 0.639 |
ABB74686.1 | ABB74685.1 | Nmul_A1383 | Nmul_A1382 | Hypothetical protein. | Phage integrase; Belongs to the 'phage' integrase family. | 0.872 |
ABB74686.1 | ABB74861.1 | Nmul_A1383 | Nmul_A1558 | Hypothetical protein. | Histone deacetylase superfamily. | 0.522 |
ABB74686.1 | ABB75342.1 | Nmul_A1383 | Nmul_A2048 | Hypothetical protein. | Glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.595 |
ABB74686.1 | ABB75595.1 | Nmul_A1383 | Nmul_A2304 | Hypothetical protein. | ATP-dependent DNA helicase RecQ. | 0.558 |
ABB74686.1 | ABB75609.1 | Nmul_A1383 | Nmul_A2318 | Hypothetical protein. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.908 |
ABB74686.1 | ABB75731.1 | Nmul_A1383 | Nmul_A2442 | Hypothetical protein. | Conserved hypothetical protein. | 0.559 |
ABB74686.1 | ABB75892.1 | Nmul_A1383 | Nmul_A2605 | Hypothetical protein. | Hypothetical protein. | 0.525 |
ABB74686.1 | coq7 | Nmul_A1383 | Nmul_A0341 | Hypothetical protein. | Putative ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. | 0.478 |
ABB74686.1 | polA | Nmul_A1383 | Nmul_A0568 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.600 |
ABB74861.1 | ABB74686.1 | Nmul_A1558 | Nmul_A1383 | Histone deacetylase superfamily. | Hypothetical protein. | 0.522 |
ABB75342.1 | ABB74686.1 | Nmul_A2048 | Nmul_A1383 | Glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein. | 0.595 |
ABB75595.1 | ABB74686.1 | Nmul_A2304 | Nmul_A1383 | ATP-dependent DNA helicase RecQ. | Hypothetical protein. | 0.558 |
ABB75595.1 | ABB75892.1 | Nmul_A2304 | Nmul_A2605 | ATP-dependent DNA helicase RecQ. | Hypothetical protein. | 0.621 |
ABB75595.1 | polA | Nmul_A2304 | Nmul_A0568 | ATP-dependent DNA helicase RecQ. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.990 |
ABB75609.1 | ABB74686.1 | Nmul_A2318 | Nmul_A1383 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.908 |
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